Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946111.1_cds_XP_016488384.1_79019
CDS Infomation

[gene=LOC107808382] [db_xref=GeneID:107808382] [protein=lactosylceramide 4-alpha-galactosyltransferase-like] [protein_id=XP_016488384.1] [location=4441..5811] [gbkey=CDS]
Sequence

ATGGACAGTGTAATTAATAATACAAAGAGAACTATCAATTCTAGTTTGTCTCAGTTTTTT
CACCATTTTTGTAATTTCCAGTTGACTAAAAGGTCCTTATATGCAATTGTTTCTTGCTTT
CTGCTTTTTCTCATAGCTTACAACAGTTCCACTGTGTTCTACATTCAAGTTCCAGTTCCG
GCCAACTCCTCGCCGGAGATTTCTAACTTTTTAACTGAAAATGTCGCCAGAAAATCAAGA
AAGTTGGTTTCTTTATCTGCTTCAACTAAACTCTCATCTTCTGTGATATATGCAGTAAAA
GAGGAAACCCCACTTCAAAAAACAAACACCCAGTTGACAATTTCTCGCAAAAATCAAAAC
TTTGTGAGTTTTACATATAATTCAGTGGCTTATCATCCTAGAAGAAGGCGAAAAAAGAAG
TCTTTGGTGAAAGTTCTTGGTTCGGGGGCAAGAATTAATGAGTTCTCAATGAGAATGAAA
ATTTTTTTTGGAGCTAAATCATCCAATACTTCCTGTAAGTATAGGTTTTTTATGACTTGG
ATTTCTTCAATTGAATCTTTTGGTGAAAGGGAACAGTTTGCTGTTGAGAGTTTATTCAAA
ACACATCCAAATGGCTGTTTGGTAGTTATGTCCACTTCAATGGATTCACCAAAGGGAATG
CAAGTTTTAAAGCCTTTCTTTGAGAAAGGATTAAGGGTAACTGCAATCTCACCTGATTAT
TATTATTTGTTTAAAAATACATTGGCTCGAGCCTGGGTTGATAGCTTAATGAAGGGTAAT
ATAGATCCAGGGGAAGTTTCTATAGGTCAGAACCTCTCAAATTTGCTTAGACTTGGTTTA
TTGTACAAGTTTGGTGGGATTTATTTAGATACAGATGTTATACTGTTGAGAAGTTTTGGG
AAGCTAAGAAATGTAATTGGGGCTCAAACTATTGATGTTGAAACAAAAAATTGGAGCAGG
TTAAATAATGCTGTAATGATTTTTGATAAGGGGCATCCTTTGTTGTACAAGTTCATTGAG
GAATTTGCACTTACATTTGATGGGAATAAATGGGGACATAATGGTCCTTACTTGGTTTCA
AGGGTTGTGTCAAGGGTAAGTGGAAGGGATGGATACAATTTCACAGTTTTGCCTCCAATG
GCTTTTTATCCAGTTGATTGGAGTAGGATTGGTAGTCTCTTTCTTGGGCCAAGGAACGAG
ACTCACTCAAAATGGTTGCTCTCTAAACTCCGGCAGATTCAGAGCCAAAGTTTGGCTGTG
CATCTTTGGAACAAACAGAGTAGAGGGCTTAAGGTTGAAGAAGGAAGCATAATCCAACAT
ATAATGTCAGATTGTTGTGTTTTCTGCAATTCTTACTCCGCAAAGTTGTAA

Peptide Sequence

PEP ID

XP_016488384.1
PEP Infomation

PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Nicotiana tabacum]
Sequence

MDSVINNTKRTINSSLSQFFHHFCNFQLTKRSLYAIVSCFLLFLIAYNSSTVFYIQVPVP
ANSSPEISNFLTENVARKSRKLVSLSASTKLSSSVIYAVKEETPLQKTNTQLTISRKNQN
FVSFTYNSVAYHPRRRRKKKSLVKVLGSGARINEFSMRMKIFFGAKSSNTSCKYRFFMTW
ISSIESFGEREQFAVESLFKTHPNGCLVVMSTSMDSPKGMQVLKPFFEKGLRVTAISPDY
YYLFKNTLARAWVDSLMKGNIDPGEVSIGQNLSNLLRLGLLYKFGGIYLDTDVILLRSFG
KLRNVIGAQTIDVETKNWSRLNNAVMIFDKGHPLLYKFIEEFALTFDGNKWGHNGPYLVS
RVVSRVSGRDGYNFTVLPPMAFYPVDWSRIGSLFLGPRNETHSKWLLSKLRQIQSQSLAV
HLWNKQSRGLKVEEGSIIQHIMSDCCVFCNSYSAKL

Transcript Sequence

Gene sequence data has not been registered.